The Baby Observational and Nutrition Study (BONUS) set out to identify microbial correlates of poor growth observed in infants with cystic fibrosis (CF) 207 infants diagnosed with cystic fibrosis during newborn screening Shotgun metagenomic sequencing of 122 samples collected from healthy controls, and 1157 stool samples from infants with CF collected at months 3, 4, 5, 6, 8, 10 and 12 of life Longitudinal, observational, multicenter cohort study.
Format
BONUS
A MbioDataset object with 23 metadata variables, 1279 shotgun metagenomic stool samples.
It contains the following collections:
"Shotgun metagenomics: 4th level EC metagenome abundance data"
"Shotgun metagenomics: Metagenome enzyme pathway abundance data"
"Shotgun metagenomics: Metagenome enzyme pathway coverage data"
"Shotgun metagenomics: Genus"
"Shotgun metagenomics: Species"
"Shotgun metagenomics: Family"
"Shotgun metagenomics: Order"
"Shotgun metagenomics: Phylum"
"Shotgun metagenomics: Class"
"Shotgun metagenomics: Kingdom"
"Shotgun metagenomics: Normalized number of taxon-specific sequence matches"