Returns a data.table of abundances, respecting the
imputeZero slot.
Usage
getAbundances(
object,
ignoreImputeZero = c(FALSE, TRUE),
includeIds = c(TRUE, FALSE),
verbose = c(TRUE, FALSE)
)
# S4 method for AbundanceData
getAbundances(
object,
ignoreImputeZero = c(FALSE, TRUE),
includeIds = c(TRUE, FALSE),
verbose = c(TRUE, FALSE)
)
Arguments
- object
AbundanceData
- ignoreImputeZero
boolean indicating whether we should respect the imputeZero slot
- includeIds
boolean indicating whether we should include recordIdColumn and ancestorIdColumns
- verbose
boolean indicating if timed logging is desired
Value
data.table of abundances